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esmfold2

aipoch/open-science/resources/skills/esmfold2

Biohub ESMFold2 / ESMFold2-Fast all-atom co-folding (Candido et al. 2026, github.com/Biohub/esm). Single-sequence and MSA modes; protein, DNA, RNA, ligand (CCD/SMILES), modified residues. FoldBench Ab-Ag 50-55%, PPI 70-77% DockQ-pass. Also covers the ESMC-{300M,600M,6B} protein language models from the same release: masked-LM logits, hidden states, mutation scoring, contact prediction, and the SAE interpretability head. MIT-licensed weights on HuggingFace org `biohub`. Use this skill when: (1) Predicting complex structures with single-sequence input, (2) Validating designed binders with ESMFold2-Fast, (3) Running ESMFold2 with MSA input, (4) Getting ESMC embeddings or per-residue mutation scores, (5) Choosing kernel backend and sampling-step settings for paper-faithful throughput.

把下面的话发给 Claude Code、Codex 或 Cursor。智能体会先检查内容,经你确认再安装。

请帮我安装这个 Agent Skill:https://github.com/aipoch/open-science/tree/main/resources/skills/esmfold2

1. 先读取该目录下的 SKILL.md 和其他文件,检查是否有可疑内容(执行未知脚本、读取密钥、向外发送数据等),用中文告诉我它会做什么、需要哪些权限;
2. 等我确认后,再把整个目录安装到 ~/.claude/skills/esmfold2/(如果你不是 Claude Code,安装到你自己约定的 skills 目录);
3. 安装后告诉我怎么触发它。

Skill 可以让智能体执行脚本。安装第三方 Skill 前务必看一遍内容,详见「安全」一课。

正在从 GitHub 读取……

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